MassSpec research
From PublicWiki
This will hold the stuff for my mass spec research with Carl Ebeling as my advisor.
Papers from John Keane
he safest and quickest route to get started is probably to accelerate the "search" process (like the Toronto team did), based on the popular open-source algorithm in the "X!Tandem" program. Here are a few links to how it works:
Open source system for analyzing, validating, and storing protein identification data. Related papers.
TANDEM: matching proteins with tandem mass spectra. Related papers.
Hardware-accelerated protein identification for mass spectrometry
Short analysis of the Toronto work on some blog
Other pages
The Global Proteome Machine Organization
