Difference between revisions of "MassSpec research"
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This will hold the stuff for my mass spec research with Carl Ebeling as my advisor. | This will hold the stuff for my mass spec research with Carl Ebeling as my advisor. | ||
| + | Meeting with Carl and John 2:00 on Friday. Don't forget. | ||
==Papers from John Keane== | ==Papers from John Keane== | ||
Revision as of 05:22, 2 February 2006
This will hold the stuff for my mass spec research with Carl Ebeling as my advisor.
Meeting with Carl and John 2:00 on Friday. Don't forget.
Papers from John Keane
he safest and quickest route to get started is probably to accelerate the "search" process (like the Toronto team did), based on the popular open-source algorithm in the "X!Tandem" program. Here are a few links to how it works:
X! Tandem flow chart (Not yet useful)
Open source system for analyzing, validating, and storing protein identification data. (Useful soon I think) Related papers.
TANDEM: matching proteins with tandem mass spectra. (Not yet useful) Related papers.
Hardware-accelerated protein identification for mass spectrometry (Useful)
Short analysis of the Toronto work on some blog (Not useful yet)
Other pages
The Global Proteome Machine Organization (Tons of open-source code to validate designs and such)
Literature References for The GPM Project (literary references are always good)
Designing hardware for protein sequence analysis (sounds related)
